vg
tools for working with variation graphs
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vg::SnarlGraph Member List

This is the complete list of members for vg::SnarlGraph, including all inherited members.

backing_graphvg::SnarlGraphprotected
edge_to_snarl_edge(edge_t edge) constvg::SnarlGraph
embed_ref_path_snarls(SnarlTraversal &traversal)vg::SnarlGraph
embed_snarl(Visit &visit)vg::SnarlGraph
embed_snarls(SnarlTraversal &traversal)vg::SnarlGraph
flip(const handle_t &handle) constvg::SnarlGraph
follow_edges_impl(const handle_t &handle, bool go_left, const std::function< bool(const handle_t &)> &iteratee) constvg::SnarlGraphprotected
for_each_handle_impl(const std::function< bool(const handle_t &)> &iteratee, bool parallel=false) constvg::SnarlGraphprotected
get_handle(const nid_t &node_id, bool is_reverse=false) constvg::SnarlGraph
get_id(const handle_t &handle) constvg::SnarlGraph
get_is_reverse(const handle_t &handle) constvg::SnarlGraph
get_length(const handle_t &handle) constvg::SnarlGraph
get_node_count() constvg::SnarlGraph
get_sequence(const handle_t &handle) constvg::SnarlGraph
has_node(nid_t node_id) constvg::SnarlGraph
max_node_id() constvg::SnarlGraph
min_node_id() constvg::SnarlGraph
node_to_snarl(handle_t handle) constvg::SnarlGraph
snarl_managervg::SnarlGraphprotected
SnarlGraph(const HandleGraph *backing_graph, SnarlManager &snarl_manager, vector< const Snarl * > snarls)vg::SnarlGraph
snarlsvg::SnarlGraphprotected