vg
tools for working with variation graphs
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vg::IntervalUnion Class Reference

#include <interval_union.hpp>

Public Member Functions

 IntervalUnion ()=default
 ~IntervalUnion ()=default
void add (size_t begin, size_t end)
void add (const pair< size_t, size_t > &interval)
void clear ()
size_t overlap (size_t begin, size_t end) const
size_t overlap (const pair< size_t, size_t > &interval) const
size_t total_size () const
size_t component_size () const
vector< pair< size_t, size_t > > get_union () const

Private Attributes

map< size_t, size_t > irvl_union
size_t union_size = 0

Detailed Description

The union of a collection of intervals

Constructor & Destructor Documentation

◆ IntervalUnion()

vg::IntervalUnion::IntervalUnion ( )
default

◆ ~IntervalUnion()

vg::IntervalUnion::~IntervalUnion ( )
default

Member Function Documentation

◆ add() [1/2]

void vg::IntervalUnion::add ( const pair< size_t, size_t > & interval)
inline

◆ add() [2/2]

void vg::IntervalUnion::add ( size_t begin,
size_t end )

◆ clear()

void vg::IntervalUnion::clear ( )

◆ component_size()

size_t vg::IntervalUnion::component_size ( ) const

◆ get_union()

vector< pair< size_t, size_t > > vg::IntervalUnion::get_union ( ) const

◆ overlap() [1/2]

size_t vg::IntervalUnion::overlap ( const pair< size_t, size_t > & interval) const
inline

◆ overlap() [2/2]

size_t vg::IntervalUnion::overlap ( size_t begin,
size_t end ) const

◆ total_size()

size_t vg::IntervalUnion::total_size ( ) const

Member Data Documentation

◆ irvl_union

map<size_t, size_t> vg::IntervalUnion::irvl_union
private

◆ union_size

size_t vg::IntervalUnion::union_size = 0
private

The documentation for this class was generated from the following files: